Merge images
DigitalMicrograph - Gatan
Combine two images of different intensity levels into one. Useful to merge diffraction patterns of different exposure times.
Make Gaussians
DigitalMicrograph - Gatan
Generate a 1D and 2D Gaussian distribution (demonstrate function overload).
LiveView radial FFT profile
Python - Gatan
Compute radial-max profiles over time from the FFT of the LiveView image in Gatan Microscopy Suite.
LiveView linear profile
Python - Gatan
Compute ROI-based profiles over time from the LiveView image in Gatan Microscopy Suite.
Live thresholding with plots
Python - Gatan
Code to process the live-view image in DigitalMicrograph, producing a binary display. The live image is thresholded, and several morphological operations are applied to create a binary display. Then the largest contiguous bright region is found and circled. A plot of the position of the center of mass of that bright region is also updated live.
Live simple copy
Python - Gatan
Code to process the live-view image in DigitalMicrograph, producing a copy. This script provides a minimal template for processing data in the live view.
Live radial profile Diff or FFT
Python - Gatan
Compute radial-max profiles of either the FFTs of HRTEM images or diffraction patterns over time. You can compute profiles from the 2D live-view image in DigitalMicrograph or in-situ 2D image data played back via the In-Situ Player. The result is a single 2D display of these profiles over time, with time as one dimension and radius as the other. Profiles are computed as often as possible.
Live radial profile
Python - Gatan
Code to compute radial-max profiles of the FFT of a live-view image in DigitalMicrograph, producing a 2D display of these profiles over time.
Live noise reduction
Python - Gatan
Code to process the live-view image in DigitalMicrograph, producing a new filtered display. A median and/or Gaussian blur can be applied.